Resultats - Bioinformatics & Computational Environmental Engineering
Bioinformatics & Computational Environmental Engineering
| Tesis Doctorals Dirigides / Theses |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Títol: Exploring the economic and environmental implications of integrating carbon capture in biorefinery systems |
| Autor: Fanourakis, Stylianos |
| Director: Jiménez Esteller, Laureano; Fernández Sabater, Alberto; Boer, Dieter-Thomas |
| Universitat: N/D |
| Any: 2024 |
| País: N/D |
| Títol: Advanced methods and applications in phylogenetic tree generation and model interpretability |
| Autor: Segura Alabart, Natàlia |
| Director: Serratosa Casanelles, Francesc D'Assís; Fernández Sabater, Alberto |
| Universitat: N/D |
| Any: 2024 |
| País: N/D |
| Títol: Wake behind a discontinuous cylinder: Unveiling the role of the large scales in wake growth and entrainment |
| Autor: Mandava, Venkata Subba Rao |
| Director: Giralt Prat, Francesc D'Assís; Herrero Sabartés, Juan |
| Universitat: N/D |
| Any: 2022 |
| País: N/D |
| Títol: Structural Pattern Recognition for Chemical-Compound Virtual Screening |
| Autor: Carlos Jesús Garcia Hernandez |
| Director: Fernández Sabater, Alberto; Serratosa Casanelles, Francesc D'Assís |
| Universitat: N/D |
| Any: 2021 |
| País: N/D |
| Publicacions en Revista / Papers |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Títol: A practical study of the proportion of non-unique neighbor-joining trees of microsatellite markers |
| Autors: Natàlia Segura-Alabart; Francesc Serratosa; Alberto Fernández |
| Any: 2024 Clau: Article |
| Revista: Computational And Structural Biotechnology Reports |
| País: N/D |
| Títol: A US perspective on closing the carbon cycle to defossilize difficult-to-electrify segments of our economy |
| Autors: Shaw, Wendy J; Kidder, Michelle K; Bare, Simon R; Delferro, Massimiliano; Morris, James R; Toma, Francesca M; Senanayake, Sanjaya D; Autrey, Tom; Biddinger, Elizabeth J; Boettcher, Shannon; Bowden, Mark E; Britt, Phillip F; Brown, Robert C; Bullock, R Morris; Chen, Jingguang G; Daniel, Claus; Dorhout, Peter K; Efroymson, Rebecca A; Gaffney, Kelly J; Gagliardi, Laura; Harper, Aaron S; Heldebrant, David J; Luca, Oana R; Lyubovsky, Maxim; Male, Jonathan L; Miller, Daniel J; Prozorov, Tanya; Rallo, Robert; Rana, Rachita; Rioux, Robert M; Sadow, Aaron D; Schaidle, Joshua A; Schulte, Lisa A; Tarpeh, William A; Vlachos, Dionisios G; Vogt, Bryan D; Weber, Robert S; Yang, Jenny Y; Arenholz, Elke; Helms, Brett A; Huang, Wenyu; Jordahl, James L; Karakaya, Canan; Kian, Kourosh (Cyrus); Kothandaraman, Jotheeswari; Lercher, Johannes; Liu, Ping; Malhotra, Deepika; Mueller, Karl T; O'Brien, Casey P; Palomino, Robert M; Qi, Long; Rodriguez, Jose A; Rousseau, Roger; Russell, Jake C; Sarazen, Michele L; Sholl, David S; Smith, Emily A; Stevens, Michaela Burke; Surendranath, Yogesh; Tassone, Christopher J; Tran, Ba; Tumas, William; Walton, Krista S |
| Any: 2024 Clau: Review |
| Revista: Nature Reviews Chemistry |
| País: N/D |
| Títol: HT Model: Using the Molecular Transformer for Predicting Hydrotreating Reactions |
| Autors: Eswaran, Sudha Cheranma Devi; Olarte, Mariefel V; Rallo, Robert; Marrlett, Laura; Harper, Juliette; Anderson, Mariella; Shapiro, Eric; Kozyra, Patrick; Starks, Alexzabria |
| Any: 2023 Clau: Article |
| Revista: Energy & Fuels |
| País: N/D |
| Títol: The MultiFurcating Neighbor-Joining Algorithm for Reconstructing Polytomic Phylogenetic Trees |
| Autors: Fernandez, Alberto; Segura-Alabart, Natalia; Serratosa, Francesc |
| Any: 2023 Clau: Article |
| Revista: Journal Of Molecular Evolution |
| País: N/D |
| Títol: A computational view on nanomaterial intrinsic and extrinsic features for nanosafety and sustainability |
| Autors: Mancardi, Giulia; Mikolajczyk, Alicja; Annapoorani, Vigneshwari K; Bahl, Aileen; Blekos, Kostas; Burkf, Jaanus; Cetin, Yarkin A; Chairetakis, Konstantinos; Dutta, Sutapa; Escorihuela, Laura; Jagiello, Karolina; Singhal, Ankush; van der Pol, Rianne; Banaresi, Miguel A; Buchete, Nicolae-Viorel; Calatayudj, Monica; Dumit, Veronica I; Gardini, Davide; Jeliazkoval, Nina; Haase, Andrea; Marcoulaki, Effie; Martorell, Benjami; Puzyn, Tomasz; Sevink, G J Agur; Simeone, Felice C; Tamm, Kaido; Chiavazzo, Eliodoro |
| Any: 2023 Clau: Article |
| Revista: Materials Today |
| País: N/D |
| Títol: Butchering knives and hafting at the Late Middle Paleolithic open-air site of Nahal Mahanayeem Outlet (NMO), Israel |
| Autors: Martin-Viveros, Juan Ignacio; Oron, Maya; Olle, Andreu; Chacon, M Gema; Sharon, Gonen |
| Any: 2023 Clau: Article |
| Revista: Scientific Reports |
| País: N/D |
| Títol: Preparing for the next pandemic via transfer learning from existing diseases with hierarchical multi-modal BERT: a study on COVID-19 outcome prediction |
| Autors: Agarwal, Khushbu; Choudhury, Sutanay; Tipirneni, Sindhu; Mukherjee, Pritam; Ham, Colby; Tamang, Suzanne; Baker, Matthew; Tang, Siyi; Kocaman, Veysel; Gevaert, Olivier; Rallo, Robert; Reddy, Chandan K |
| Any: 2022 Clau: Article |
| Revista: Scientific Reports |
| País: N/D |
| Títol: Chest wall mechanics during mechanical chest compression and its relationship to CPR-related injuries and survival |
| Autors: Azeli, Youcef; Barberia, Eneko; Fernandez, Alberto; Garcia-Vilana, Silvia; Bardaji, Alfredo; Hardig, Bjarne Madsen |
| Any: 2022 Clau: Article |
| Revista: Resuscitation Plus |
| País: N/D |
| Títol: A machine learning COVID-19 mass screening based on symptoms and a simple olfactory test |
| Autors: Azeli, Youcef; Fernandez, Alberto; Capriles, Federico; Rojewski, Wojciech; Lopez-Madrid, Vanesa; Sabate-Lissner, David; Serrano, Rosa Maria; Rey-Renones, Cristina; Civit, Marta; Casellas, Josefina; El Ouahabi-El Ouahabi, Abdelghani; Foglia-Fernandez, Maria; Sarra, Salvador; Llobet, Eduard |
| Any: 2022 Clau: Article |
| Revista: Scientific Reports |
| País: N/D |
| Títol: Integration of Solar Photovoltaic Systems into Power Networks: A Scientific Evolution Analysis |
| Autors: Elomari, Youssef; Norouzi, Masoud; Marin-Genesca, Marc; Fernandez, Alberto; Boer, Dieter |
| Any: 2022 Clau: Review |
| Revista: Sustainability |
| País: N/D |
| Títol: Molecular structural dataset of lignin macromolecule elucidating experimental structural compositions |
| Autors: Eswaran, Sudha Cheranma Devi; Subramaniam, Senthil; Sanyal, Udishnu; Rallo, Robert; Zhang, Xiao |
| Any: 2022 Clau: Article |
| Revista: Scientific Data |
| País: N/D |
| Títol: Wake behind a discontinuous cylinder: unveiling the role of the large scales in wake growth and entrainment |
| Autors: Mandava, V S R; Herrero, Joan; Kopp, Gregory A; Giralt, Francesc |
| Any: 2022 Clau: Article |
| Revista: Journal Of Fluid Mechanics |
| País: N/D |
| Títol: Nonunique UPGMA clusterings of microsatellite markers |
| Autors: Segura-Alabart, Natalia; Serratosa, Francesc; Gomez, Sergio; Fernandez, Alberto |
| Any: 2022 Clau: Review |
| Revista: Briefings In Bioinformatics |
| País: N/D |
| Títol: Clinical outcomes and safety of passive leg raising in out-of-hospital cardiac arrest: a randomized controlled trial |
| Autors: Azeli, Youcef; Bardaji, Alfredo; Barberia, Eneko; Lopez-Madrid, Vanesa; Blade-Creixenti, Jordi; Fernandez-Sender, Laura; Bonet, Gil; Rica, Elena; Alvarez, Susana; Fernandez, Alberto; Axelsson, Christer; Jimenez-Herrera, Maria F |
| Any: 2021 Clau: Article |
| Revista: Critical Care |
| País: N/D |
| Títol: Hydraulic resistance and protein fouling resistance of a zirconia membrane with a tethered PVP layer |
| Autors: Chen Y; Rovira-Bru M; Giralt F; Cohen Y |
| Any: 2021 Clau: Article |
| Revista: Water |
| País: N/D |
| Títol: CATMoS: Collaborative acute toxicity modeling suite |
| Autors: Mansouri, Kamel; Karmaus, Agnes L; Fitzpatrick, Jeremy; Patlewicz, Grace; Pradeep, Prachi; Alberga, Domenico; Alepee, Nathalie; Allen, Timothy E H; Allen, Dave; Alves, Vinicius M; Andrade, Carolina H; Auernhammer, Tyler R; Ballabio, Davide; Bell, Shannon; Benfenati, Emilio; Bhattacharya, Sudin; Bastos, Joyce, V; Boyd, Stephen; Brown, J B; Capuzzi, Stephen J; Chushak, Yaroslav; Ciallella, Heather; Clark, Alex M; Consonni, Viviana; Daga, Pankaj R; Ekins, Sean; Farag, Sherif; Fedorov, Maxim; Fourches, Denis; Gadaleta, Domenico; Gao, Feng; Gearhart, Jeffery M; Goh, Garett; Goodman, Jonathan M; Grisoni, Francesca; Grulke, Christopher M; Hartung, Thomas; Hirn, Matthew; Karpov, Pavel; Korotcov, Alexandru; Lavado, Giovanna J; Lawless, Michael; Li, Xinhao; Luechtefeld, Thomas; Lunghini, Filippo; Mangiatordi, Giuseppe F; Marcou, Gilles; Marsh, Dan; Martin, Todd; Mauri, Andrea; Muratov, Eugene N; Myatt, Glenn J; Dac-Trung Nguyen; Nicolotti, Orazio; Note, Reine; Pande, Paritosh; Parks, Amanda K; Peryea, Tyler; Polash, Ahsan H; Rallo, Robert; Roncaglioni, Alessandra; Rowlands, Craig; Ruiz, Patricia; Russo, Daniel P; Sayed, Ahmed; Sayre, Risa; Sheils, Timothy; Siegel, Charles; Silva, Arthur C; Simeonov, Anton; Sosnin, Sergey; Southall, Noel; Strickland, Judy; Tang, Yun; Teppen, Brian; Tetko, Igor, V; Thomas, Dennis; Tkachenko, Valery; Todeschini, Roberto; Toma, Cosimo; Tripodi, Ignacio; Trisciuzzi, Daniela; Tropsha, Alexander; Varnek, Alexandre; Vukovic, Kristijan; Wang, Zhongyu; Wang, Liguo; Waters, Katrina M; Wedlake, Andrew J; Wijeyesakere, Sanjeeva J; Wilson, Dan; Xiao, Zijun; Yang, Hongbin; Zahoranszky-Kohalmi, Gergely; Zakharov, Alexey, V; Zhang, Fagen F; Zhang, Zhen; Zhao, Tongan; Zhu, Hao; Zorn, Kimberley M; Casey, Warren; Kleinstreuer, Nicole C |
| Any: 2021 Clau: Article |
| Revista: Environmental Health Perspectives |
| País: N/D |
| Títol: Versatile Linkage: a Family of Space-Conserving Strategies for Agglomerative Hierarchical Clustering |
| Autors: Fernandez, Alberto; Gomez, Sergio |
| Any: 2020 Clau: Article |
| Revista: Journal Of Classification |
| País: N/D |
| Títol: Learning the Edit Costs of Graph Edit Distance Applied to Ligand-Based Virtual Screening |
| Autors: Garcia-Hernandez, Carlos; Fernandez, Alberto; Serratosa, Francesc |
| Any: 2020 Clau: Article |
| Revista: Current Topics In Medicinal Chemistry |
| País: N/D |
| Títol: Visualizing biomolecular electrostatics in virtual reality with UnityMol-APBS |
| Autors: Laureanti, Joseph A; Brandi, Juan; Offor, Elvis; Engel, David; Rallo, Robert; Ginovska, Bojana; Martinez, Xavier; Baaden, Marc; Baker, Nathan A |
| Any: 2020 Clau: Article |
| Revista: Protein Science |
| País: N/D |
| Títol: Distributed heterogeneous compute infrastructure for the study of additive manufacturing systems |
| Autors: Thomas, Mathew; Schram, Malachi; Fox, Kevin; Strube, Jan; Oblath, Noah S; Rallo, Robert; Kennedy, Zachary C; Varga, Tamas; Battu, Anil K; Barrett, Christopher A |
| Any: 2020 Clau: Article |
| Revista: Mrs Advances |
| País: N/D |
| Llibres / Books |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Capítols de Llibre / Book chapters |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Títol: Ciencia, tecnología e innovación: tecnologías digitales para la educación STEM |
| Autors: Carme Grimalt Álvaro; Víctor López Simó; Robert Rallo Moya; Cintia Refojo Seronero; Cristina Valls |
| Any: 2022 Clau: Book Chapters |
| Altres Documents / Other documents |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Patents Sol.licitades / Patents |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Títol: EP4352744: Covid-19 screening method |
| Autors: FERNÁNDEZ SABATER, ALBERTO (Autor o Coautor) |
| Any: 2024 Tipus: Patent |
| Organismes: N/D |
| Països: N/D |
| Congressos / Conferences |
| 2020 | 2021 | 2022 | 2023 | 2024 |
|---|
| Autor/a: Segura-Alabart N, Fernández A, Kensert A, Cabooter D, Serratosa F |
| Títol: Evaluation metrics in saliency maps applied to graph regression |
| Congrés/acte: N/D |
| Congrés/acte: Speaker |
| Any: 2024 |
| Autor/a: Ioanis Katakis, Marc Arenas, Azael Fabregat, Xavier Farriol, Alberto Fernández, Josep Font, Marta Giamberini, Joan Herrero, Laureano Jiménez, Fèlix Llovell, María Teresa Novo, Jordi Pallarés, Clara Salueña, Frank Stüber, Anton Vernet |
| Títol: Virtualización del Laboratorio de Ciencias de la Ingeniería Química para su Integración en el Entorno Virtual Profesional de la Escuela Técnica Superior de Ingeniería Química (ETSEQ, URV) |
| Congrés/acte: N/D |
| Congrés/acte: Poster |
| Any: 2022 |
| Autor/a: Segura-Alabart N, Serratosa F, Gómez S, Fernández A |
| Títol: Nonunique UPGMA clusterings of microsatellite markers |
| Congrés/acte: N/D |
| Congrés/acte: Poster |
| Any: 2022 |
| Autor/a: Youssef Elomari, M. Marín-Genescà, Alberto Fernández, Dieter Boer |
| Títol: Trends and Gaps on the Research of Integration of Solar Photovoltaic Power Plants into Power Networks through a Bibliometric Analysis |
| Congrés/acte: N/D |
| Congrés/acte: Speaker |
| Any: 2022 |
| Autor/a: Garcia-Hernandez, C.; Fernández, A.; Serratosa, F. |
| Títol: Training a molecular dissimilarity measure for target specific activities |
| Congrés/acte: N/D |
| Congrés/acte: Poster |
| Any: 2020 |
| Autor/a: Youcef Azeli; Eneko Barbería; Alberto Fernández; Alfredo Bardaj¿¿; Bjarne Madsen Härdig |
| Títol: Compression force variation during mechanical CPR and its relation to CPR injuries |
| Congrés/acte: Resuscitation 2020 - Abstracts Of The Virtual Congress |
| Congrés/acte: Speaker |
| Any: 2020 |
